PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963105.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 282aa    MW: 30684.8 Da    PI: 7.472
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963105.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702184.93.2e-57892193154
          DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 
                      g++sCqdCGnqakkdC+h+RCR CC++rgf C+thvkstWvpaakrr+rqq+laa++++          kr+ +            ++++++ +
  XP_022963105.1  89 GGGISCQDCGNQAKKDCTHMRCRSCCNTRGFPCQTHVKSTWVPAAKRRQRQQKLAALQTHP---------KRHTD-----------YNIPTTN-T 162
                     5789**************************************************9985443.........33333...........2333333.3 PP

          DUF702  98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                     + le+ ++P+e++s+avfrcvr+ss dd ++++aYqtav+igGhvfkGiLydqG+e+
  XP_022963105.1 163 SGLEIGNFPAELNSPAVFRCVRLSSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPEN 219
                     3788999************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MSMSGFFTLG STDQEHQQPD TNRPNQTLPP DTLFWYKPGS VELWQPQQHQ QQSLFQARSH  60
NNNNNNNLYS DESSSRSGNL MMISSGSGGG GISCQDCGNQ AKKDCTHMRC RSCCNTRGFP  120
CQTHVKSTWV PAAKRRQRQQ KLAALQTHPK RHTDYNIPTT NTSGLEIGNF PAELNSPAVF  180
RCVRLSSTDD TDDQYAYQTA VNIGGHVFKG ILYDQGPENN YLPGETSSGG GGGLQPLNFI  240
AGAADANAAS SAALPLLDPS SLYSAPLNSF MAGTQFFLPP RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.12e-42SRS family protein