PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963136.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 316aa    MW: 34875.6 Da    PI: 5.8824
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963136.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.11.6e-13147193455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h ++Er+RR+++ ++f  L  l+P +     kK++Ka+iL  A+ YIk+L+
  XP_022963136.1 147 DHVIAERKRREKLSQRFVALSALIPRL-----KKMDKASILGDAITYIKDLE 193
                     5999***********************.....9****************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MELEAPFMDD LEMNPFECTL HELGFQAFSD QSYTSHTDLD HSVQTRQPCE VAEETPAKQP  60
RATGSWNNCC TASMAASSSS SRIISFGNSH SSSPPSNRVK PNFEMWCETN RDLASVIEQG  120
SNCSPKSGVG MKRSAGVVNR SPLAGQDHVI AERKRREKLS QRFVALSALI PRLKKMDKAS  180
ILGDAITYIK DLEERLKAAD EEAAKATVES AVVMNRSDDL STTDDNIWSD GAIPDIEARV  240
SGKDVLLRIH GKKCKGCVSN ILKQIEKLNL TVLNTTAMPF PNLHLHITII AQMDDDFCIT  300
VKELVQKLTQ ASVEFM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152157ERKRRE
2153158RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.13e-45bHLH family protein