PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963137.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 316aa MW: 34875.6 Da PI: 5.8824

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963137.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.1	1.6e-13	147	193	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L l+P + kK++Ka+iL A+ YIk+L+ XP_022963137.1 147 DHVIAERKRREKLSQRFVALSALIPRL-----KKMDKASILGDAITYIKDLE 193 5999*********************.....9**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MELEAPFMDD LEMNPFECTL HELGFQAFSD QSYTSHTDLD HSVQTRQPCE VAEETPAKQP 60 RATGSWNNCC TASMAASSSS SRIISFGNSH SSSPPSNRVK PNFEMWCETN RDLASVIEQG 120 SNCSPKSGVG MKRSAGVVNR SPLAGQDHVI AERKRREKLS QRFVALSALI PRLKKMDKAS 180 ILGDAITYIK DLEERLKAAD EEAAKATVES AVVMNRSDDL STTDDNIWSD GAIPDIEARV 240 SGKDVLLRIH GKKCKGCVSN ILKQIEKLNL TVLNTTAMPF PNLHLHITII AQMDDDFCIT 300 VKELVQKLTQ ASVEFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	157	ERKRRE
2	153	158	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	3e-45	bHLH family protein