PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963153.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 212aa    MW: 24129.8 Da    PI: 5.0264
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963153.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20137185355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++GVr+++ +g+W+AeIrdp+    r +r++lg+f+tae+Aa+a+++a+ +++g
  XP_022963153.1 137 FRGVRQRP-WGKWAAEIRDPR----RaTRVWLGTFDTAEQAARAYDRAAIEFRG 185
                     8*******.**********82....48***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MSGSSGDLDS APFHSTCKLA VEEEHSIMVS ALTHVVSDGR IGLTHTQYQL LAAFDDAQLP  60
AIELWFPSGD TCEVCRIVGC LGCNYFQDGN YNHNHNQNQN QIQIQNVVPE EEDEEKDQDE  120
EEKIVVGNKK RRMKRTFRGV RQRPWGKWAA EIRDPRRATR VWLGTFDTAE QAARAYDRAA  180
IEFRGDKAKL NFPASDYQTT EQGEKPKLEI QE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128135NKKRRMKR
2129134KKRRMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.19e-33ERF family protein