PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963170.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 195aa    MW: 22246.8 Da    PI: 7.81
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963170.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.29.7e-30101158259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYG+K++k++++pr+YY+C+s+gC+vkk+ver++ed ++v++tYeg H he
  XP_022963170.1 101 QDGFKWRKYGKKSIKDNPNPRNYYKCSSNGCRVKKRVERDREDSSYVITTYEGIHSHE 158
                     8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MAMNSLQNPT DFEDSSTSFM DLLDFSGYLL PDFWLEPEST VLPEATIGSR SRSMEEATST  60
MDKTSIDEWH ERRGVKRKQK GRGGGCHKVA FRTKSELEVL QDGFKWRKYG KKSIKDNPNP  120
RNYYKCSSNG CRVKKRVERD REDSSYVITT YEGIHSHESP FTKCCNDPIF HSHGSCPDST  180
YLHHSSPPCS STTTL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17278RRGVKRK
27279RRGVKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.13e-40WRKY family protein