PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963224.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 508aa MW: 57584.2 Da PI: 8.3756

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963224.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.1	5.4e-10	386	433	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd+++++G+g+W+ I r++ +Rt+ +++++w+++l XP_022963224.1 386 WTLTEVMQLVDGIAEYGTGRWTHIKRHLFahsPHRTPIDLRDKWRNLL 433 ***************************9999*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MDQEAHFCRK FTNMKSHWDL DQLLGDANQV GEFHAANNLP NTYAEVAENS FRQNRGLHLG 60 NLSSECKSQG SSRSDADAFG ISELSAAMIM EAEYNDTHVE RGFTHDLCAG TNSSRVTPLE 120 GSICDTILDN RNIHKLVNLS SECKSQGSSR SDTDAFGISE LSAAMIMETE FNNTHVERGF 180 THDLCAGLRT NSSRVTPHEG SICDTILDNR SIHKFNTNES YIENRDLSDE NVKGDIVASK 240 LVSCSRERRL RKPTRRFIEE FSDSKSESNK GRKKTPTKDK YMKGTSTEES SHVSHEVQVS 300 TPKSEWHCGT SVPVQSRSQR RHPKKHVPVS GFLSEDVYSA TECKNVYSIL QGFLSEDVYS 360 ATECKNVYSS AKRCKKHDRR KHQKMWTLTE VMQLVDGIAE YGTGRWTHIK RHLFAHSPHR 420 TPIDLRDKWR NLLRASCVNI QNRKGIERKQ SHASRPLPKS LLQRVYELAN IYPYPKERSP 480 KSVEATTPAP DLTESNALPF NWGRKKDE

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MDQEAHFCRK FTNMKSHWDL DQLLGDANQV GEFHAANNLP NTYAEVAENS FRQNRGLHLG  60
NLSSECKSQG SSRSDADAFG ISELSAAMIM EAEYNDTHVE RGFTHDLCAG TNSSRVTPLE  120
GSICDTILDN RNIHKLVNLS SECKSQGSSR SDTDAFGISE LSAAMIMETE FNNTHVERGF  180
THDLCAGLRT NSSRVTPHEG SICDTILDNR SIHKFNTNES YIENRDLSDE NVKGDIVASK  240
LVSCSRERRL RKPTRRFIEE FSDSKSESNK GRKKTPTKDK YMKGTSTEES SHVSHEVQVS  300
TPKSEWHCGT SVPVQSRSQR RHPKKHVPVS GFLSEDVYSA TECKNVYSIL QGFLSEDVYS  360
ATECKNVYSS AKRCKKHDRR KHQKMWTLTE VMQLVDGIAE YGTGRWTHIK RHLFAHSPHR  420
TPIDLRDKWR NLLRASCVNI QNRKGIERKQ SHASRPLPKS LLQRVYELAN IYPYPKERSP  480
KSVEATTPAP DLTESNALPF NWGRKKDE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	253	ERRLRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	4e-25	MYB_related family protein