PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963232.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family DBB
Protein Properties Length: 152aa    MW: 16578.8 Da    PI: 5.2186
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963232.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box25.13.8e-08433534
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                     C+ +e+  ++lfC  ++  lC+ C ++ H
  XP_022963232.1  4 LCDSCENAAATLFCAADEAALCAACDVKVH 33
                    6**************************998 PP
2zf-B_box253.8e-085292238
        zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
                    e  +C+ +e+ ++ ++Ce +++ lC +C +  H g    H+
  XP_022963232.1 52 EVSCCDICENAPAFFYCEIDGSSLCLQCDVVVHVGgkrmHK 92
                    6789****************************976677776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MRILCDSCEN AAATLFCAAD EAALCAACDV KVHMCNKLAS RHVRVGLASP SEVSCCDICE  60
NAPAFFYCEI DGSSLCLQCD VVVHVGGKRM HKRYLRLGQR VEFPGDKQND PKDLNVQAME  120
QVETVRGQNQ DGVDSNGDGH SKRGNEVIDL NM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.11e-58DBB family protein