PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963274.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 376aa MW: 41947.1 Da PI: 6.5959

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963274.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.8	2.2e-32	242	297	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a+++LGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_022963274.1 242 KQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 297 79****************************************************97 PP
2	Myb_DNA-binding	45.9	1.3e-14	244	295	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++vda ++lGg t+k I + m+ g+t ++ks++qky+ XP_022963274.1 244 RRCWSPELHRRFVDALHRLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 295 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MELSLDLSLD FVPKTIPEIL LELSSISDSF TKQSKLDDYV KRLEDEMRKI DAFKRELPLC 60 VLLLQDAILR LKEEVLQFQS LKDQPVIEKF IPLKGSSEEA DGESEEREKK RWLSSTQLWN 120 TNFNFDDDIP NPKSNMNLKG DEDDRSVPQT PIEHWDCAKR RRAELFKDQN NFVKGATKED 180 VAFSEVPKLT LMTPISDPFS GNLTLKNGTA RGSSASVSGL SSPAAQITGH PKLSQHQQTI 240 RKQRRCWSPE LHRRFVDALH RLGGSQVATP KQIRELMQVD GLTNDEVKSH LQKYRLHVRK 300 LGPTEGSGGG GWMAEAHQGD HRSKTSATHA GSPDGPLQGG GSGKALSITE GESMEGEEDA 360 KSEGHSWKGR IQKVGD

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MELSLDLSLD FVPKTIPEIL LELSSISDSF TKQSKLDDYV KRLEDEMRKI DAFKRELPLC  60
VLLLQDAILR LKEEVLQFQS LKDQPVIEKF IPLKGSSEEA DGESEEREKK RWLSSTQLWN  120
TNFNFDDDIP NPKSNMNLKG DEDDRSVPQT PIEHWDCAKR RRAELFKDQN NFVKGATKED  180
VAFSEVPKLT LMTPISDPFS GNLTLKNGTA RGSSASVSGL SSPAAQITGH PKLSQHQQTI  240
RKQRRCWSPE LHRRFVDALH RLGGSQVATP KQIRELMQVD GLTNDEVKSH LQKYRLHVRK  300
LGPTEGSGGG GWMAEAHQGD HRSKTSATHA GSPDGPLQGG GSGKALSITE GESMEGEEDA  360
KSEGHSWKGR IQKVGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	5e-51	G2-like family protein