PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963278.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

E2F/DP

Protein Properties

Length: 476aa MW: 52837.4 Da PI: 5.3674

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963278.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.1	9.9e-26	146	211	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++++gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn i wkg XP_022963278.1 146 RHDSSLGLLTKKFINLIKQARDGILDLNKAAETL---KV--QKRRIYDITNVLEGIGLIEKKLKNIICWKG 211 6799****************************...88..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MRGGGSRAPN RSEPLPHSQP AQILPPLKRQ LAFELSRPSF VPSGDYYHFG GGSSNALDQQ 60 PDAIVVKPLK PKQKGAMYNH VIESSDCIHD QSSSKDALSF VQTPVSAKGG RVYNKAKTPR 120 RATSGPGTPI SDTSTYSPLT PAGNCRHDSS LGLLTKKFIN LIKQARDGIL DLNKAAETLK 180 VQKRRIYDIT NVLEGIGLIE KKLKNIICWK GFNAQSPGNV DSDTAMLQVD VEKLSFEERR 240 LEDKISALQE RLRNLSEDEN IQKWLFVTEE DIKSLPCFQN ETLIAIKAPH GTTLEVPDPD 300 EAVDDPQRRY RIVLRSTMGP IDVYLVSQFE EKIEEMNVVQ TPSSFLHASS SGSNEHLATE 360 AIIGESSRNE IEPQAQLSQY SSICDVHGSN EFPGGMMKIM PSEIDNDADY WLLSDAEVSI 420 TDMWRTDTIA ADIVWDQSDM VPHDFIISDV SAQRPRPVSP HSERGGMPSD VNLRQR

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MRGGGSRAPN RSEPLPHSQP AQILPPLKRQ LAFELSRPSF VPSGDYYHFG GGSSNALDQQ  60
PDAIVVKPLK PKQKGAMYNH VIESSDCIHD QSSSKDALSF VQTPVSAKGG RVYNKAKTPR  120
RATSGPGTPI SDTSTYSPLT PAGNCRHDSS LGLLTKKFIN LIKQARDGIL DLNKAAETLK  180
VQKRRIYDIT NVLEGIGLIE KKLKNIICWK GFNAQSPGNV DSDTAMLQVD VEKLSFEERR  240
LEDKISALQE RLRNLSEDEN IQKWLFVTEE DIKSLPCFQN ETLIAIKAPH GTTLEVPDPD  300
EAVDDPQRRY RIVLRSTMGP IDVYLVSQFE EKIEEMNVVQ TPSSFLHASS SGSNEHLATE  360
AIIGESSRNE IEPQAQLSQY SSICDVHGSN EFPGGMMKIM PSEIDNDADY WLLSDAEVSI  420
TDMWRTDTIA ADIVWDQSDM VPHDFIISDV SAQRPRPVSP HSERGGMPSD VNLRQR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	185	LKVQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-131	E2F/DP family protein