PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963334.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 256aa    MW: 28381.4 Da    PI: 8.6577
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963334.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.44.9e-18107161256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq   Lee F+ + +++ ++++ LA++l+L  rqV vWFqNrRa+ k
  XP_022963334.1 107 RKKLRLTKEQSALLEESFKLHCTLNPKQKQALARELNLRPRQVEVWFQNRRARTK 161
                     788899***********************************************98 PP
2HD-ZIP_I/II124.45.2e-40107196191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rl+keq++lLEesF+ + +L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL+ke +eL+ +l
  XP_022963334.1 107 RKKLRLTKEQSALLEESFKLHCTLNPKQKQALARELNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTDENRRLHKELQELK-AL 196
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MGFDDLPNTG LLLGLGLTLQ SKPACLSQKP NNPVNLFSFP AVESEPSLTL GLSTTADLCR  60
QPSPHSTVSS LSGGRVKRER DVSGEDIEEE KASSRVSDEE EDGSNARKKL RLTKEQSALL  120
EESFKLHCTL NPKQKQALAR ELNLRPRQVE VWFQNRRART KLKQTEVDCE FLKRCCETLT  180
DENRRLHKEL QELKALKLTK PLFMQMPAAT LTMCPSCERI GGATATVNGN GNSKAAFSMA  240
PKPQFYKPFT NPSAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156164RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.15e-94HD-ZIP family protein