PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963361.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 308aa MW: 33203.1 Da PI: 8.6445

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963361.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2e-18	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v+++G+++W++I+r + gR++k+c++rw + XP_022963361.1 12 KGPWSPEEDDALQRLVQKHGPRNWSLISRSIH-GRSGKSCRLRWCNQ 57 79****************************.*********985 PP
2	Myb_DNA-binding	54.2	3.3e-17	66	108	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEde +++a++ +G++ W+tIar + gRt++ +k++w++ XP_022963361.1 66 PFSPEEDETIIRAHANFGNR-WATIARLLS-GRTDNAVKNHWNST 108 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MAVNRNEMDR IKGPWSPEED DALQRLVQKH GPRNWSLISR SIHGRSGKSC RLRWCNQLSP 60 QVEHRPFSPE EDETIIRAHA NFGNRWATIA RLLSGRTDNA VKNHWNSTLK RKCSSMMNEG 120 FEGESNNQPL KKSFSAGAAV NISNGLYMNP GSPSGSDISD SSVPVVSPIV YRPVARTGSV 180 VPPGESTLSS ATDPPTSLSL SLPGVSAAGD SSNREGSGSA AQVPLLAAFA QIQSMAASEL 240 ARASQLDNRP DESAEKINGF GIFSADLMAV MQEMIRSEVK SYMEGLSDPR GRGCFQQAKA 300 GGIRNVGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	4e-83	MYB family protein