PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963447.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 284aa    MW: 31524.1 Da    PI: 7.0097
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963447.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.6e-10194237755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ ++RR+ri +++  L+el+P+       K++ +++LekA+ Y+k Lq
  XP_022963447.1 194 IAAKNRRERISERLKILQELVPNG-----SKVDLVTMLEKAISYVKFLQ 237
                     5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MALANSSVHE ADGMDKAGGY IKSIPIATHD TPNATFLFRN TTNYQLDHHQ QQQQQQQQLP  60
HSLINFKCGI DSIFHKNNES LLSFEPQGVC QDTYNWDDHQ RLMEDPNCFQ TATNGYSSPK  120
ENKNGDGSVY DWLYSEASGV SDAIQEAEGA HEVANQKRPH MGESSGSVSK KQCTAAAAKK  180
QKPKSSTAKD PQSIAAKNRR ERISERLKIL QELVPNGSKV DLVTMLEKAI SYVKFLQLQV  240
KILATDEFWP VQGGKAPDIS QVKEAIDAIL SSQRERSSSS NSQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.15e-57bHLH family protein