PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963490.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 218aa    MW: 24857.5 Da    PI: 9.0131
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963490.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.42.8e-1966120256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++k+q + Lee F+ n++++ +++e LA++l+L+ rqV vWFqNrRa+ k
  XP_022963490.1  66 RKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSK 120
                     788899***********************************************98 PP
2HD-ZIP_I/II116.41.6e-3766154190
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                     +kk+rlsk+q++lLEesF+ +++L+p++K++la eL+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+e+n+rL++e eeLr +
  XP_022963490.1  66 RKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTERECEYLKRWFGSLTEQNRRLRQELEELR-A 154
                     69*************************************************************************************9.4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MAIIPINSSN LDLSISMPGS SPSRPPFVDG CAVREFDMNR LPEVGDGEEE WAEEEEESYI  60
NDCKPRKKLR LSKDQSRLLE ESFRLNHTLN PKQKEALAME LKLKPRQVEV WFQNRRARSK  120
LKQTERECEY LKRWFGSLTE QNRRLRQELE ELRAMKVAPT AVVSAHGRQP PLPISAITMC  180
PRCERMSAST ITYGKGASSA STLPPEAFLS ALKLRQPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16470KPRKKLR
2115123RRARSKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01430.13e-61HD-ZIP family protein