PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963542.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 296aa    MW: 34016.4 Da    PI: 5.9955
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963542.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.86.3e-51101381129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF P+deelv++yL kk+ ++++    ++ e+d++++ePw+Lp+ +k +++ewyfFs rd+kyatg r+nrat+ gyWkatgkd++v+++
  XP_022963542.1  10 LPPGFRFYPSDEELVCHYLYKKIMNEQVLK-GTLVEIDLHTCEPWQLPEVAKLNSNEWYFFSFRDRKYATGYRTNRATTCGYWKATGKDRTVVDS 103
                     79************************9655.78***************88888999*************************************98 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129
                      +ge vg+kktLvfy++rap+g kt W+mhe+rle
  XP_022963542.1 104 sTGEIVGMKKTLVFYRNRAPNGIKTGWIMHEFRLE 138
                     78899***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MGLKDIGASL PPGFRFYPSD EELVCHYLYK KIMNEQVLKG TLVEIDLHTC EPWQLPEVAK  60
LNSNEWYFFS FRDRKYATGY RTNRATTCGY WKATGKDRTV VDSSTGEIVG MKKTLVFYRN  120
RAPNGIKTGW IMHEFRLEAP HRLPKEDWVL CRVFQKGKQE DYNNKLNQHF TFGNFEHVPS  180
VLVQAPSPPP SDPSKTVMPS SYNVDIDIAS LSSSIAPEQI SHSHTGSCSF LHLLQQLPQE  240
KQDNNPKTDQ LFCPKTNESD YGVMWEMDLE EHTFRDGVVS NLDQMEFDVD SSQVFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.19e-89NAC family protein