PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963582.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 254aa MW: 28774.8 Da PI: 6.5196

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963582.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.7	1.2e-14	77	130	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55 +++ hn+rEr+RR ++ + ++ Lr+llP+ + +skK s +i k+v+YI Lq XP_022963582.1 77 KKEEHNARERQRRMELSQLYFSLRSLLPNaR---RSKKrWSSTTIINKVVDYIPTLQ 130 6889***********************44...88888************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MAVAPWESYY TLTDENNGEE QTLLPKGGEA LCGEIGGSMA EVAALLGLEE DIYGGFGREN 60 AAFPPAMNAN IEPSNAKKEE HNARERQRRM ELSQLYFSLR SLLPNARRSK KRWSSTTIIN 120 KVVDYIPTLQ KEIENMKEKK QKMIKEKGKS NERVLVDEKE GLENDNLSVL VHQVCKGEVI 180 IQICINQRNN MITFSNLIQK AEEEGLRIIG ASTVCVSPHH PTLTSHLHFQ MDKSVEEGDD 240 YKSILRKRVI SWLC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	107	142	RRSKKRWSSTTIINKVVDYIPTLQKEIENMKEKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71200.1	5e-20	bHLH family protein