PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963584.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 299aa    MW: 35360.9 Da    PI: 8.4988
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963584.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix76.73.6e-2457139186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+ qe+++ + +r e+++r+ ++k++k lWe  ++km+e+gf+rs++qCk+kw+nl +ryk ++++e +    s++++p++++l+
  XP_022963584.1  57 QWSIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCETMEPEI---SRQQFPFYTELQ 139
                     7********************************************************************97...55679****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MEGHNPHPLV HLHLQQQQQQ QQQLQHPPPP PPPQQQHLHQ NLADQTAVNA VADRFPQWSI  60
QETKEFLMIR AELDQRFMET KRNKLLWEIT AAKMKEKGFN RSAEQCKCKW KNLVTRYKGC  120
ETMEPEISRQ QFPFYTELQA IFGARMHRIL WAEAESGGSG SKKKTTVLSS DEDDENEDSD  180
GDGGDTKASG RKSKKKGKGN AGGSSSINHL KEILEDFMNQ QIQMEIQWRE AFESREKERQ  240
IREMEWRRKM EALEHERIML ERRWREREEQ RRMRDEVRAE KRDALITALL NKLRRDDHI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.16e-54Trihelix family protein