PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963617.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 208aa    MW: 23891.6 Da    PI: 5.1556
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963617.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM112.93.5e-35121301128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelvv++L++k++  +++  +vi+++d++ ++Pw+L+ k+ +e ++wyf+s++           r+t++gyW+  g+d +vls+
  XP_022963617.1  12 LPPGFRFHPTDEELVVHFLHRKAALLPCHP-DVIPDLDLFPYDPWELEGKALGEGNRWYFYSRKID--------ARVTDNGYWNPLGRDDPVLST 97 
                     79*************************999.99**************977778899******9866........599****************99 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++vg+kk + f+ + a ++ kt+W+mheyrl
  XP_022963617.1  98 aTSQVVGMKKYFLFH-AAAADPIKTNWIMHEYRL 130
                     78889**********.6777889*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MAAADHSHNF NLPPGFRFHP TDEELVVHFL HRKAALLPCH PDVIPDLDLF PYDPWELEGK  60
ALGEGNRWYF YSRKIDARVT DNGYWNPLGR DDPVLSTATS QVVGMKKYFL FHAAAADPIK  120
TNWIMHEYRL PDAVSSSSSS SSSSSSTRSS RRRGRPKRQD YSKWVLCRVY ERDEEKEEEE  180
DGAELSCLDE VFLSLEDLDE ISLPTRIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.11e-75NAC family protein