PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963634.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 180aa    MW: 19950.6 Da    PI: 6.2997
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963634.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000194769123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C  C++ F++   L  H++ H
  XP_022963634.1 47 YECVFCKRGFTTAQALGGHMNIH 69
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MNPNPIPTAS VTATVTAATA TNEDQSSKTT TEEIDQTSIQ ISSGRSYECV FCKRGFTTAQ  60
ALGGHMNIHR KDRVKAKTTS PSKPELFNNH PSHQPFQTYF PPSSSWYLGS STTPPHDHQL  120
SNDTNNPQYL NAFNMSLASR SSPALASTDR REKRSDDNSG ENNDDNHEEL DLELRLGHDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.13e-15C2H2 family protein