PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963669.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 226aa    MW: 24866.4 Da    PI: 5.2495
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963669.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.7e-182472355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a++ a+++l+g
  XP_022963669.1 24 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAAVAYDCAARSLRG 72
                    67******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MSPSPSKPKR KQQQPPPETT PHRFLGVRRR PWGRYAAEIR DPSTKERHWL GTFDTAEEAA  60
VAYDCAARSL RGSLARTNFL YSDSLPPPPP PPSAALPPNQ APLLLPTPPP HFHQIPPSRD  120
SPPSLFSVDG DGGAELPPFP PAISSESENY NYNYNYNYNY NQGLMELQNS GFEYFNQSPT  180
EIGSCFGFDS SSEYVHGPIF SSMPAVSDAG AGEFPSPAAN FYFPQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.11e-26ERF family protein