PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963778.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 235aa    MW: 26100.8 Da    PI: 6.509
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963778.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.41.2e-056890123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C++C + F++   L  H+++H
  XP_022963778.1 68 YTCTYCRREFKSAQALGGHMNVH 90
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MATKLELGFQ HDPSLPETVR DGWNLNGLNP MQTPDVVTDA DDDDSWEVRA FAEDTRNVMG  60
TTWPPRSYTC TYCRREFKSA QALGGHMNVH RRDRARLHQA PLSNTTKPSS SSSSISNSFI  120
IPPPDFNGGG LCLLYQFPNP NSVNGGINIP SLFSVSNHSF NSFLPSMAMS RGFPVNDHRL  180
RGLGESNFSR SEQQFSTSME NGNQELDLEL RLGHGPDSTR THIENGQKIS KRSSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.12e-28C2H2 family protein