PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963780.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 230aa    MW: 26324.9 Da    PI: 5.8318
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963780.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.48.4e-2191431128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka.eekewyfFskrdkkyatgk....rknratk..sgyWkatg 87 
                     lp+G+rF+Ptd++l+ +yL  k+++++    +++ ++d+y ++ePw++  ++ + + +++yfF+k +++++++     + nr++   +g+W+   
  XP_022963780.1   9 LPVGVRFRPTDQQLL-QYLLWKIHDQPYFK-RAVLDCDLYgDMEPWEIWLRFGGtDGENLYFFTKLKRSTNNSGrlsvHINRKVGltNGTWSGEN 101
                     799************.99*******99655.689999999457*****855544166688******9999986623334455433448******* PP

             NAM  88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + ++++++  +++ +g  k + + +++ p+ ++ +W+mhey+l
  XP_022963780.1 102 SANPIFAAktDKTIIGYCKRFRYENAQLPE-HHGEWIMHEYSL 143
                     ******98666777*********9888888.89********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MDSHDRPLLP VGVRFRPTDQ QLLQYLLWKI HDQPYFKRAV LDCDLYGDME PWEIWLRFGG  60
TDGENLYFFT KLKRSTNNSG RLSVHINRKV GLTNGTWSGE NSANPIFAAK TDKTIIGYCK  120
RFRYENAQLP EHHGEWIMHE YSLHQDSIQQ ANEPEALAIA DYLFIGLGSK NWFDQVLATP  180
CIIGQANLAV DMGPQMFGVI GQALEFDEEI EMFASMSPKR SQIFHGSIPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.22e-13NAC family protein