PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963781.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 186aa    MW: 21936.9 Da    PI: 9.1084
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963781.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.44e-2191431128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka.eekewyfFskrdkkyatgk....rknratk..sgyWkatg 87 
                     lp+G+rF+Ptd++l+ +yL  k++g++    +++ ++d+y ++ePw++  ++ + + +++yfF+k +++++++     + nr++   +g+W+   
  XP_022963781.1   9 LPVGVRFRPTDQQLL-QYLIWKIHGQPYFK-RAVLDCDLYgEMEPWEIWLRFGGtDGEDLYFFTKLKRSTNNSGrlsaHINRKVGlaNGTWSGEN 101
                     79*************.9**********655.789999998468*****854444166789******9999986623223455433559******* PP

             NAM  88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +  +++++  +++ +g  k + + +++ p+ ++ +W+mhey+l
  XP_022963781.1 102 SASSIFATktDKTIIGYCKRFRYENAQLPE-HHGEWIMHEYSL 143
                     *****998666677*********9888888.89********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MDSHDCPLLP VGVRFRPTDQ QLLQYLIWKI HGQPYFKRAV LDCDLYGEME PWEIWLRFGG  60
TDGEDLYFFT KLKRSTNNSG RLSAHINRKV GLANGTWSGE NSASSIFATK TDKTIIGYCK  120
RFRYENAQLP EHHGEWIMHE YSLHQDSIQQ AVDSNYVLCR FKKNERFKRK LQKDLEEQQL  180
SKKRMT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.22e-16NAC family protein