PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963791.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 169aa    MW: 19732 Da    PI: 7.0053
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963791.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.3e-054264123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_022963791.1 42 YSCNFCKREFKSAQALGGHMNVH 64
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MEGGKIIAND QEQEQEQERR WSFVVKDETF SCNQFQWPAK NYSCNFCKRE FKSAQALGGH  60
MNVHRRDRAR MRLLPSWMAD NSYPNPNSCF TFKLNSNNSL CSNTQEEKKA FGSCSWNNYK  120
PSFSSQDDHD DVLHVLKKKK KKNLVNLELK MGNLEDDSSN EDLDLELHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42410.12e-22C2H2 family protein