PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963816.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 215aa    MW: 24252.4 Da    PI: 5.4889
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963816.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-1877128256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g+
  XP_022963816.1  77 SYRGVRRRP-WGKYAAEIRDSTR---HgVRVWLGTFDSAEAAALAYDQAAFSMRGA 128
                     69*******.**********422...25*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MESSYFSFSD SDFSTGSSFG SAESSFSWSE FFPIPLPDEF LGNQPESESK IAVKEEIEVS  60
SIDFAEEKQR KTTAEKSYRG VRRRPWGKYA AEIRDSTRHG VRVWLGTFDS AEAAALAYDQ  120
AAFSMRGALA VLNFPVEMVR ESLQDIKYQL EEGCSPVVAL KRKHSLRRKS AAAAAVEKKK  180
MKKKKNMVIF EDLGTEYLEE LLMLSSYESC SINPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161183KRKHSLRRKSAAAAAVEKKKMKK
2167185RRKSAAAAAVEKKKMKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-37ERF family protein