PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963836.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 267aa    MW: 30091.4 Da    PI: 6.6508
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963836.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702178.92.3e-55712005154
          DUF702   5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskke 99 
                     +++CqdCGnqakkdC+h RCRtCCksrgf+C+thvkstWvpa+krrerq q ++  +++++       ++        q+a           +  
  XP_022963836.1  71 SINCQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQSQ------LDQ------PDQTAPVD--------TPG 145
                     579*********************************************8777665333211......111......11222222........236 PP

          DUF702 100 letsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                     le++++P+e +s+avfrcv+vs++dd ee++aYqt+v+igGh+fkGiLydqG+e+
  XP_022963836.1 146 LEVANFPAEFNSSAVFRCVKVSAIDDVEEQFAYQTSVNIGGHMFKGILYDQGPES 200
                     78899************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MTGLFYLSEK QEENQEQRGR EQQLFLSKGL EIWPQQNLEN YISFGVGPTR RNFMINASDR  60
PDQFVPRLGF SINCQDCGNQ AKKDCSHLRC RTCCKSRGFH CQTHVKSTWV PATKRRERQL  120
QRHQIVRQQS QLDQPDQTAP VDTPGLEVAN FPAEFNSSAV FRCVKVSAID DVEEQFAYQT  180
SVNIGGHMFK GILYDQGPES TPNLSTGGES SYCYGGEDDN QALELVIGAS NGGWRSNKPT  240
PFMESSLYPI PINTFNTGTQ NFPSSRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51060.12e-58SRS family protein