PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963936.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 237aa MW: 26524 Da PI: 8.286

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963936.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.6	1.2e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l+++++++G g+W++ ++ g+ R++k+c++rw +yl XP_022963936.1 14 KGPWTPQEDQILINYITLYGHGNWRALPKQSGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	50.9	3.6e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+e ++++++ lG++ W++Ia++++ gRt++++k+ w+++l XP_022963936.1 67 RGNLTKEEEETIIKLHRVLGNR-WSAIAARLP-GRTDNEIKNVWNTHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MVRAPCCEKM GLKKGPWTPQ EDQILINYIT LYGHGNWRAL PKQSGLLRCG KSCRLRWINY 60 LRPDIKRGNL TKEEEETIIK LHRVLGNRWS AIAARLPGRT DNEIKNVWNT HLKKRQNYAA 120 VNRPICGGGH EEPAAQPFKF TTFHSMQNPA SASSPPHCSS ESSSIVLPEN GDLSTNNLPE 180 ADENFWVEVL AGDQIATVGS QQGFGGESQG QFGNLKMDQP ALDSMDFWYN ICSRLGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	2e-72	MYB family protein