PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963978.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 355aa MW: 39815.5 Da PI: 7.6738

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963978.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.3	3.1e-32	170	223	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_022963978.1 170 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 223 9****************************************************7 PP
2	Myb_DNA-binding	46.9	6.2e-15	171	222	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_022963978.1 171 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 222 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MRMELFPAQP DLSLQISPPN TNKPSSSWIT TPSQEEVDLR FWNNLSLEST KSTPKHPPPP 60 PPPNHHLLHH HHHISAPLFE TLNKTQHRPA IFHHDTTSLL NPPPPPPPLP FPGFLQPIRG 120 IPVYHQTINP SGIGVDGGRG ITPSSVDHRQ IMMRSRFLSR FPAKRSMRAP RMRWTSTLHA 180 RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTDRA AASSGQSDLY 240 ENASSGDTSN IEDIIFDIQK PATGRQNESL VHQTTRQNPL QDEDYHALWS NSSREAWLHG 300 LPNDSSRDLS SSLENDTDLK CSNNERLSER SSSSDDCGGT NSHKPNLEFT LGRPI

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MRMELFPAQP DLSLQISPPN TNKPSSSWIT TPSQEEVDLR FWNNLSLEST KSTPKHPPPP  60
PPPNHHLLHH HHHISAPLFE TLNKTQHRPA IFHHDTTSLL NPPPPPPPLP FPGFLQPIRG  120
IPVYHQTINP SGIGVDGGRG ITPSSVDHRQ IMMRSRFLSR FPAKRSMRAP RMRWTSTLHA  180
RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTDRA AASSGQSDLY  240
ENASSGDTSN IEDIIFDIQK PATGRQNESL VHQTTRQNPL QDEDYHALWS NSSREAWLHG  300
LPNDSSRDLS SSLENDTDLK CSNNERLSER SSSSDDCGGT NSHKPNLEFT LGRPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	6e-71	G2-like family protein