PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022964007.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 214aa    MW: 23606.7 Da    PI: 5.37
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022964007.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-194898155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + ++GVr ++ +g+Wv+eIr p++   + r++lg+f t+e+Aa+a++aa+++++g
  XP_022964007.1 48 PVFRGVRKRS-WGKWVSEIRQPRK---KSRIWLGTFPTPEMAARAHDAAALCIKG 98
                    579****888.**********843...6***********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MAKPKSSFPT TPPPLSSSFP STRPVSGAGP AQPDPPPRKR TRDCNRHPVF RGVRKRSWGK  60
WVSEIRQPRK KSRIWLGTFP TPEMAARAHD AAALCIKGDS AILNYPELAS FLPRPASLMP  120
HDIQAAAAKA AAMATALPSP SEEEELSEIV ELPNIEDDFG TESLNEFKLV TESWEWWEYV  180
AMPLAAEFGS CSFSDQLAAE DSLFPCSFYG ALWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.13e-45ERF family protein