PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022964017.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 266aa    MW: 29588.3 Da    PI: 8.0165
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022964017.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.90.00021561941255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +++ +      +K + a++L +A+ YI+ Lq
  XP_022964017.1 156 RKEKLVDRITALHQIVSPF-----GKTDTASVLSEAIGYIRFLQ 194
                     6667778899999999887.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MMAGNPNWWG MFSPSFSSFA EQPQSWSQLL LGEEERVLNQ TQMGHYQPKK LENWEHQILD  60
HTTTTNPSPP PPPNFVDIVK QEFSNTNKFL NFSSNNTNFP DLTHNQPAAA ADHLPEVRFS  120
CKSFEQLNHI APVSGSACKK ARIHPPSSSQ PPLKVRKEKL VDRITALHQI VSPFGKTDTA  180
SVLSEAIGYI RFLQGQIEAL SYPYLRSAPK HVRDAGSGGE EMRREEKAVK ELRSRGLCLV  240
PVSCTQLVGG DNNGAAYWAP AYGNGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.19e-47bHLH family protein