PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964189.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 601aa MW: 66211.2 Da PI: 5.3627

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964189.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.7	2.2e-07	484	532	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v G g+W+ I + Rt ++k++w+++l XP_022964189.1 484 AWTLVEVIKLVEGVSICGAGRWSEIKKLSFssySYRTSVDLKDKWRNLL 532 7*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MGTVVGFVEN EGKIVDSGIL QDVSTLSPNQ IADPVVYKLV RVDGDGRFVP ATDDEVMEVE 60 DLLEDDKSEK VEDAGQIVEC IPTEGTLFGK PHVEISNGLP QSEGDAGYTA RLEYIEEVLQ 120 KVKQEERLRL ACGSLNYPSA YVDGDRKGSD QHGSLVTDEK FQSQISLQEI SHCSPSLNEN 180 HENEHGSLGN FLKHPDKSVE SESSDAICTT SKPEFSMLKG DICLDNLSIR ELHECFKATF 240 GRDTTVKDKS WLKRRIAMGL TNSCDIPASS FIIKEGKFVE ESSQNVVGVS TIPTAEALNI 300 ECTGSPTTYC LETKDHHHVE EIELDHGIDD QHEERAAVKR IRKPTRRYIE ELSEVESREF 360 VPKVISLNKS SVSDSVSANS IERPSKKVCS DRGRTVITRL DSLGGSGVQV PCVSRVRRSR 420 PRKNIVALVF TLPDKDQNPS VKDTNEVEEK NLEEKPTDSG NASDDNAIIV PTPKGGSRRK 480 HHRAWTLVEV IKLVEGVSIC GAGRWSEIKK LSFSSYSYRT SVDLKDKWRN LLKASFAQTP 540 VGEGVSSRKH VSVSIPEQIL LQVRELAEMH AQIPPSNHGQ GKLGGVSSGS NMHEISPAVC 600 L

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MGTVVGFVEN EGKIVDSGIL QDVSTLSPNQ IADPVVYKLV RVDGDGRFVP ATDDEVMEVE  60
DLLEDDKSEK VEDAGQIVEC IPTEGTLFGK PHVEISNGLP QSEGDAGYTA RLEYIEEVLQ  120
KVKQEERLRL ACGSLNYPSA YVDGDRKGSD QHGSLVTDEK FQSQISLQEI SHCSPSLNEN  180
HENEHGSLGN FLKHPDKSVE SESSDAICTT SKPEFSMLKG DICLDNLSIR ELHECFKATF  240
GRDTTVKDKS WLKRRIAMGL TNSCDIPASS FIIKEGKFVE ESSQNVVGVS TIPTAEALNI  300
ECTGSPTTYC LETKDHHHVE EIELDHGIDD QHEERAAVKR IRKPTRRYIE ELSEVESREF  360
VPKVISLNKS SVSDSVSANS IERPSKKVCS DRGRTVITRL DSLGGSGVQV PCVSRVRRSR  420
PRKNIVALVF TLPDKDQNPS VKDTNEVEEK NLEEKPTDSG NASDDNAIIV PTPKGGSRRK  480
HHRAWTLVEV IKLVEGVSIC GAGRWSEIKK LSFSSYSYRT SVDLKDKWRN LLKASFAQTP  540
VGEGVSSRKH VSVSIPEQIL LQVRELAEMH AQIPPSNHGQ GKLGGVSSGS NMHEISPAVC  600
L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	417	423	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-106	MYB_related family protein