PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022964204.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 218aa    MW: 25010.7 Da    PI: 6.9447
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022964204.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.78.7e-301158350
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    ien + rqvtfskRrng++KKA+ELSvLCdaeva+iifs++gklye++
  XP_022964204.1 11 IENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFA 58
                    9**********************************************8 PP
2K-box76.95.2e-26891701899
           K-box  18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     ++e+a L k+ie+L+ ++R++lGedL+s+s+ eLqq+e qLeks+ kiR++K e++ eqi++l++kek l+ en +L +k+e
  XP_022964204.1  89 HEEAATLMKKIEQLEVSKRKMLGEDLGSCSIDELQQVELQLEKSVCKIRARKVEVFEEQIKQLKHKEKLLEAENAKLLEKWE 170
                     579***************************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MVRGKTQMRL IENATSRQVT FSKRRNGLMK KAFELSVLCD AEVALIIFSP RGKLYEFANS  60
SMQATLERYR KHAKTKEALD PPSLEHLNHE EAATLMKKIE QLEVSKRKML GEDLGSCSID  120
ELQQVELQLE KSVCKIRARK VEVFEEQIKQ LKHKEKLLEA ENAKLLEKWE SEAEGVKEVE  180
RGENLMNYAE SSSPSSEVET ELFIGPPETR PRTFLSLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.17e-71MIKC_MADS family protein