PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964375.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 434aa MW: 50057.8 Da PI: 6.5108

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964375.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	77.7	1.7e-24	108	204	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li+a++++++++ ++ +kk++W+ sk+m+erg+++sp+qC++k+++lnkryk+++++ +++ t++++++ +++d XP_022964375.1 108 KWTDKMVKLLITAVSYIGDDIASDYegggrrkfqiiQKKGKWKLMSKVMAERGYQVSPQQCEDKFNDLNKRYKRLNDMIGRGtTCQVVENPALLD 202 7************999999986445566778899*******************************************97799999998887 PP trihelix 84 ql 85 + XP_022964375.1 203 VI 204 66 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MEGSLSQGLI PGGASYGGPD LQGSFKVHNQ AQHHHLHTHQ GSSVNPSTQE GFLLLQNCDH 60 TMSLVDYSKG ERCKNSQSDD EPSFNEDGID AHNETIKGKK GSMWHRVKWT DKMVKLLITA 120 VSYIGDDIAS DYEGGGRRKF QIIQKKGKWK LMSKVMAERG YQVSPQQCED KFNDLNKRYK 180 RLNDMIGRGT TCQVVENPAL LDVIDYLTDK EKDDVRKILN SKQLFYEEMC SYHNSNQLHL 240 PHDPALQRSL QLACRVRDDH DYDEPRRHQK DDFDENEHGE TDEHDDFEEN FAPHGDDTLS 300 LGGSVKRLKR GQDFDDAHAC GNSLNSLDCN RGSHAYSQTQ FAQGDIAHLE TESMKGSSSQ 360 KQWMELRLLQ LEDHKLQTRV EMLELEKQKF KWERVNKKKD RELEKMRMIN ERMKLENERV 420 ALDIKQKEIG SRIH

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MEGSLSQGLI PGGASYGGPD LQGSFKVHNQ AQHHHLHTHQ GSSVNPSTQE GFLLLQNCDH  60
TMSLVDYSKG ERCKNSQSDD EPSFNEDGID AHNETIKGKK GSMWHRVKWT DKMVKLLITA  120
VSYIGDDIAS DYEGGGRRKF QIIQKKGKWK LMSKVMAERG YQVSPQQCED KFNDLNKRYK  180
RLNDMIGRGT TCQVVENPAL LDVIDYLTDK EKDDVRKILN SKQLFYEEMC SYHNSNQLHL  240
PHDPALQRSL QLACRVRDDH DYDEPRRHQK DDFDENEHGE TDEHDDFEEN FAPHGDDTLS  300
LGGSVKRLKR GQDFDDAHAC GNSLNSLDCN RGSHAYSQTQ FAQGDIAHLE TESMKGSSSQ  360
KQWMELRLLQ LEDHKLQTRV EMLELEKQKF KWERVNKKKD RELEKMRMIN ERMKLENERV  420
ALDIKQKEIG SRIH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-153	Trihelix family protein