PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022964463.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 357aa    MW: 39232.9 Da    PI: 7.0657
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022964463.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.71.1e-12114158347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_022964463.1 114 PWTEEEHRLFLFGLQKLGKGDWRGISRNFVITRTPTQVASHAQKY 158
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPS RGGRVGSGAL SSGGCGGGVK LFGVRLTDGS FIKKSASMGN  60
LSAHYHSSSS AAASPNPDSP NSDAVHDTDG FLSDDPSHAT CSANRGAERK KGVPWTEEEH  120
RLFLFGLQKL GKGDWRGISR NFVITRTPTQ VASHAQKYFI RLSNATRRKR RSSLFDMVPE  180
TETDLLRAPE DEVLHGYQAK ETENTGSQPS LNLSLNSEFH IMETAVEENG KELDEPKMEV  240
AGFPPMIPGY ISAYVPVPFS IWAPSTVPIE EEKGVEMCHH EVLKPIPVVP KEPVNVDELV  300
GMSQLTLREH EREHKEPSPL TLKLISEPSR RLSAFHPNAR VSRSELNKDD NDTNKAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.15e-82MYB_related family protein