PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964474.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 383aa MW: 44023.8 Da PI: 7.9363

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964474.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	75.1	9.7e-24	193	246	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+l Wt++LH+ F++a+e L G++kA Pk+il++m+v+gL e+v SHLQk+R XP_022964474.1 193 KPKLIWTQQLHKTFLQAIEAL-GIDKAHPKEILQHMNVPGLRKENVSSHLQKFRF 246 79*****************.******************************6 PP
2	Myb_DNA-binding	32.5	2.1e-10	196	245	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 + WT+++++ +++a++ lG + ++k I ++m+ g+ +++ s++qk++ XP_022964474.1 196 LIWTQQLHKTFLQAIEALGIDkaHPKEILQHMNvPGLRKENVSSHLQKFR 245 56**********************************************97 PP
3	Response_reg	58.5	3.8e-20	15	123	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vd + + ++++ ++l gy e+ +a+ + +al+++ke++ ++lil+D +p+m +ell++i e+ ++lpi+++t+ ++e l +l G XP_022964474.1 15 VLVVDHDSTTLKIVSKMLGICGY-EAVTAKCAIDALRIVKERKndIHLILIDTHLPDMGRYELLEKIMEQTSTLPIVAMTTDDNEIVKLGCLFKG 108 89*******************.9999*******887777******************99999******************* PP ESEEEESS--HHHHH CS Response_reg 94 akdflsKpfdpeelv 108 a+ +l+Kp ++++ XP_022964474.1 109 AMLCLVKPLTMKNIK 123 ******9998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MELTKKWMLY EELRVLVVDH DSTTLKIVSK MLGICGYEAV TAKCAIDALR IVKERKNDIH 60 LILIDTHLPD MGRYELLEKI MEQTSTLPIV AMTTDDNEIV KLGCLFKGAM LCLVKPLTMK 120 NIKDLWQFLF IGGREQSISI RTSNRVQKES TDENDVDKST DKKSQKTKRK EHDEEVSTRQ 180 VEGDGSKSTG LKKPKLIWTQ QLHKTFLQAI EALGIDKAHP KEILQHMNVP GLRKENVSSH 240 LQKFRFSLKR DPDVKKKTFE SFETVQILNH RTKLPINVNV FMANPQETQP QPCNNLSSTS 300 INFNLMGSCD VVSSESCFSK VITSQTCLMN STRRRSLEDQ ERRQRFECNR KEMTSTMVEE 360 QGHCMFKVDE ELDGVLDVHD LLF

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MELTKKWMLY EELRVLVVDH DSTTLKIVSK MLGICGYEAV TAKCAIDALR IVKERKNDIH  60
LILIDTHLPD MGRYELLEKI MEQTSTLPIV AMTTDDNEIV KLGCLFKGAM LCLVKPLTMK  120
NIKDLWQFLF IGGREQSISI RTSNRVQKES TDENDVDKST DKKSQKTKRK EHDEEVSTRQ  180
VEGDGSKSTG LKKPKLIWTQ QLHKTFLQAI EALGIDKAHP KEILQHMNVP GLRKENVSSH  240
LQKFRFSLKR DPDVKKKTFE SFETVQILNH RTKLPINVNV FMANPQETQP QPCNNLSSTS  300
INFNLMGSCD VVSSESCFSK VITSQTCLMN STRRRSLEDQ ERRQRFECNR KEMTSTMVEE  360
QGHCMFKVDE ELDGVLDVHD LLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	4e-43	ARR-B family protein