PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964475.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 382aa MW: 43895.6 Da PI: 7.7318

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964475.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	66.5	4.6e-21	193	242	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kp+l Wt++LH+ F++a+e L G++kA Pk+il++m+v+gL e+v SHLQ XP_022964475.1 193 KPKLIWTQQLHKTFLQAIEAL-GIDKAHPKEILQHMNVPGLRKENVSSHLQ 242 79*****************.**************************9 PP
2	Myb_DNA-binding	27.5	7.4e-09	196	242	2	45
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 + WT+++++ +++a++ lG + ++k I ++m+ g+ +++ s++q XP_022964475.1 196 LIWTQQLHKTFLQAIEALGIDkaHPKEILQHMNvPGLRKENVSSHLQ 242 56*******************************************98 PP
3	Response_reg	58.5	3.8e-20	15	123	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vd + + ++++ ++l gy e+ +a+ + +al+++ke++ ++lil+D +p+m +ell++i e+ ++lpi+++t+ ++e l +l G XP_022964475.1 15 VLVVDHDSTTLKIVSKMLGICGY-EAVTAKCAIDALRIVKERKndIHLILIDTHLPDMGRYELLEKIMEQTSTLPIVAMTTDDNEIVKLGCLFKG 108 89*******************.9999*******887777******************99999******************* PP ESEEEESS--HHHHH CS Response_reg 94 akdflsKpfdpeelv 108 a+ +l+Kp ++++ XP_022964475.1 109 AMLCLVKPLTMKNIK 123 ******9998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MELTKKWMLY EELRVLVVDH DSTTLKIVSK MLGICGYEAV TAKCAIDALR IVKERKNDIH 60 LILIDTHLPD MGRYELLEKI MEQTSTLPIV AMTTDDNEIV KLGCLFKGAM LCLVKPLTMK 120 NIKDLWQFLF IGGREQSISI RTSNRVQKES TDENDVDKST DKKSQKTKRK EHDEEVSTRQ 180 VEGDGSKSTG LKKPKLIWTQ QLHKTFLQAI EALGIDKAHP KEILQHMNVP GLRKENVSSH 240 LQFRFSLKRD PDVKKKTFES FETVQILNHR TKLPINVNVF MANPQETQPQ PCNNLSSTSI 300 NFNLMGSCDV VSSESCFSKV ITSQTCLMNS TRRRSLEDQE RRQRFECNRK EMTSTMVEEQ 360 GHCMFKVDEE LDGVLDVHDL LF

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MELTKKWMLY EELRVLVVDH DSTTLKIVSK MLGICGYEAV TAKCAIDALR IVKERKNDIH  60
LILIDTHLPD MGRYELLEKI MEQTSTLPIV AMTTDDNEIV KLGCLFKGAM LCLVKPLTMK  120
NIKDLWQFLF IGGREQSISI RTSNRVQKES TDENDVDKST DKKSQKTKRK EHDEEVSTRQ  180
VEGDGSKSTG LKKPKLIWTQ QLHKTFLQAI EALGIDKAHP KEILQHMNVP GLRKENVSSH  240
LQFRFSLKRD PDVKKKTFES FETVQILNHR TKLPINVNVF MANPQETQPQ PCNNLSSTSI  300
NFNLMGSCDV VSSESCFSKV ITSQTCLMNS TRRRSLEDQE RRQRFECNRK EMTSTMVEEQ  360
GHCMFKVDEE LDGVLDVHDL LF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	6e-41	ARR-B family protein