PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964477.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 381aa MW: 43797.5 Da PI: 7.5025

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964477.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	57.1	3.9e-18	193	241	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kp+l Wt++LH+ F++a+e L G++ + Pk+il++m+v+gL e+v SHLQ XP_022964477.1 193 KPKLIWTQQLHKTFLQAIEAL-GID-THPKEILQHMNVPGLRKENVSSHLQ 241 79*****************.888.79********************9 PP
2	Myb_DNA-binding	27.7	6.4e-09	196	241	2	45
SSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwq 45 + WT+++++ +++a++ lG + ++k I ++m+ g+ +++ s++q XP_022964477.1 196 LIWTQQLHKTFLQAIEALGIDtHPKEILQHMNvPGLRKENVSSHLQ 241 56******************************************98 PP
3	Response_reg	58.5	3.8e-20	15	123	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vd + + ++++ ++l gy e+ +a+ + +al+++ke++ ++lil+D +p+m +ell++i e+ ++lpi+++t+ ++e l +l G XP_022964477.1 15 VLVVDHDSTTLKIVSKMLGICGY-EAVTAKCAIDALRIVKERKndIHLILIDTHLPDMGRYELLEKIMEQTSTLPIVAMTTDDNEIVKLGCLFKG 108 89*******************.9999*******887777******************99999******************* PP ESEEEESS--HHHHH CS Response_reg 94 akdflsKpfdpeelv 108 a+ +l+Kp ++++ XP_022964477.1 109 AMLCLVKPLTMKNIK 123 ******9998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MELTKKWMLY EELRVLVVDH DSTTLKIVSK MLGICGYEAV TAKCAIDALR IVKERKNDIH 60 LILIDTHLPD MGRYELLEKI MEQTSTLPIV AMTTDDNEIV KLGCLFKGAM LCLVKPLTMK 120 NIKDLWQFLF IGGREQSISI RTSNRVQKES TDENDVDKST DKKSQKTKRK EHDEEVSTRQ 180 VEGDGSKSTG LKKPKLIWTQ QLHKTFLQAI EALGIDTHPK EILQHMNVPG LRKENVSSHL 240 QFRFSLKRDP DVKKKTFESF ETVQILNHRT KLPINVNVFM ANPQETQPQP CNNLSSTSIN 300 FNLMGSCDVV SSESCFSKVI TSQTCLMNST RRRSLEDQER RQRFECNRKE MTSTMVEEQG 360 HCMFKVDEEL DGVLDVHDLL F

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MELTKKWMLY EELRVLVVDH DSTTLKIVSK MLGICGYEAV TAKCAIDALR IVKERKNDIH  60
LILIDTHLPD MGRYELLEKI MEQTSTLPIV AMTTDDNEIV KLGCLFKGAM LCLVKPLTMK  120
NIKDLWQFLF IGGREQSISI RTSNRVQKES TDENDVDKST DKKSQKTKRK EHDEEVSTRQ  180
VEGDGSKSTG LKKPKLIWTQ QLHKTFLQAI EALGIDTHPK EILQHMNVPG LRKENVSSHL  240
QFRFSLKRDP DVKKKTFESF ETVQILNHRT KLPINVNVFM ANPQETQPQP CNNLSSTSIN  300
FNLMGSCDVV SSESCFSKVI TSQTCLMNST RRRSLEDQER RQRFECNRKE MTSTMVEEQG  360
HCMFKVDEEL DGVLDVHDLL F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-38	ARR-B family protein