PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964565.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 341aa MW: 36449.7 Da PI: 7.6704

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964565.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120.3	2.3e-37	74	176	2	103
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec........eaesssssasnsssg 88 ++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++++a ++ + +ss++ XP_022964565.1 74 PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMsvngtlkiP-------TTTSSNQ 161 5799************************************************************99999555422223321.......2222222 PP TCP 89 kaaksaakskksqks 103 ++a ++a +k+++++ XP_022964565.1 162 DSADQSAGKKRRKRP 176 222222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MADIQKQEYN DDDDEDSPVT DLRMNDSDSS RMDLLALAPK QEDPDDSHDS DPPPSQIQVV 60 NFAPEIAKTV SVLPPKRAST KDRHTKVEGR GRRIRIPATC AARIFQLTRE LGHKSDGETI 120 RWLLERAEPA IIAATGTGTI PAIAMSVNGT LKIPTTTSSN QDSADQSAGK KRRKRPANSD 180 YVDVNDAVSV SVSNGVVHSG TSTTAAVQQA LPPGFVPVWA IPSNAIIPGA VFMVPSVACS 240 STRPQLFSFP APGAPLVNTT ARPISTVVSK ADTSHIQSST TNQSSSSSSA STSKSESVMA 300 PISSSTVPTS SKTTTRMLRD FSLEIYDKKE LQFMSRSASK H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	170	174	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	2e-54	TCP family protein