PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022964618.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 265aa    MW: 29056.6 Da    PI: 7.3729
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022964618.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.11.2e-18188222135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +Cg+ kTp+WR gp g+ktLCnaCG+++++ +l
  XP_022964618.1 188 CLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRL 222
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MESSLAFMDD LLDFSSDIGE EDEEDDVVPP RSSTAADSSE FNAASLPDDT SSARILLEDC  60
GEEELEWLSN EDAFPAVSTF VDILSDHHHH HPPPPLTKVS KQNSPVSVLE SSSVSSHSET  120
NSTKSSSHGS VLMSCCVGLK VPSKARSKRR RGRHISGHHL WFKQQPSSKN VKQVVPTTTT  180
TTAIGRKCLH CGAEKTPQWR AGPLGPKTLC NACGVRFKSG RLVPEYRPAS SPTFTPVLHS  240
NSHRKVMEMR RQKQLSMVVN PMDKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.11e-56GATA family protein