PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964841.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 209aa MW: 24387.5 Da PI: 5.6679

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964841.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.1	1.5e-16	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +lv+ v ++G ++W+ Ia+ g++Rt+k+c++rw +yl XP_022964841.1 10 KGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYL 57 79********************************************97 PP
2	Myb_DNA-binding	53.8	4.6e-17	63	108	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+ E+ l++d++ ++G++ W++Iar+++ gRt++++k++w++++ XP_022964841.1 63 RGKITPHEERLILDLHSKWGNR-WSRIARKLP-GRTDNEIKNFWRTHM 108 8999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MVLQEESMRK GPWTEQEDFQ LVCFVGLFGD RRWDFIAKVS GLKRTGKSCR LRWVNYLHPG 60 LKRGKITPHE ERLILDLHSK WGNRWSRIAR KLPGRTDNEI KNFWRTHMRK VAKAAGHDHV 120 VVSPSSSAQI IEIGEELIDR REEEDGYSMD DIWRDIDDQS NVINQVCDQS NFECGPMSMP 180 PWDYGEYSPW TVVEEENKVF DYGEAVALS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	5e-75	MYB family protein