PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965007.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 337aa MW: 37784.9 Da PI: 6.1891

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965007.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.8e-12	136	187	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ +++l+P++ + ++ + a+i +++++k+L+ XP_022965007.1 136 QRMTHIAVERNRRRQMNDHLNVIKSLIPTS---YIQRGDQASIIGGTIDFVKELE 187 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MERLQGPINP SFYGACSDMG CSRQELSSLE FDEFDEAYLF TSSLDEKMPF LHMLQCVEEP 60 FKEPSFQNLL KLQQHLSNDK PWKQEVNSAS CRVSPECNQN GGLCRTQMEN APLPTKERRK 120 RKRLRPAKNK EEVESQRMTH IAVERNRRRQ MNDHLNVIKS LIPTSYIQRG DQASIIGGTI 180 DFVKELEQLL ECLEAQRKER KGEGEGDEEG SPTSSSATGM ASNGRIGEGV CAEVKSEVGE 240 IEVTMIQAHV NLKIKCPKRQ GQLLKAIVAL EDLRLSVLHL NISTSQATAT VLYSFNLRIE 300 DECKLGSAVQ IAGAVHEILS FISDGSQVND VKGNFRQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	117	124	ERRKRKRL
2	118	123	RRKRKR
3	137	148	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	5e-67	bHLH family protein