PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022965194.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YB
Protein Properties Length: 182aa    MW: 19417.6 Da    PI: 5.3178
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022965194.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB177.81e-5519114297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     re+dr+lPianv+rimkk+lP+nakiskdake+vqecvsefisfvt+easdkc++ekrktingddllwa+atlGfedyv+plk+yl+++re+ege
  XP_022965194.1  19 REHDRLLPIANVGRIMKKALPGNAKISKDAKEIVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGE 113
                     799*******************************************************************************************9 PP

           NF-YB  97 k 97 
                     +
  XP_022965194.1 114 R 114
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MADSDNDSGG GYQKSPSPRE HDRLLPIANV GRIMKKALPG NAKISKDAKE IVQECVSEFI  60
SFVTGEASDK CHNEKRKTIN GDDLLWAMAT LGFEDYVDPL KLYLQRFREI EGERTALASR  120
DSSSSAAATA TAAAGAANSA FFDGGGEFGG GMGMTMTMPP NVYGSNGPRW DGPGFTTTGR  180
PR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.13e-64NF-YB family protein