PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965313.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 742aa MW: 82130.3 Da PI: 4.8919

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965313.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.3	0.00031	561	598	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R++i +++ eLr ++P+ a K s + L ++++Y+ Lq XP_022965313.1 561 RQQIQDRLKELRGIIPSgA------KCSIDSLLDRTIKYMLFLQ 598 89*************77......7777779******9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence
MAETELGSVL NRICSTNHWS YGVFWCFDRR NSMVLTLEDI WYEEQVGLVA ANMLQQVHML 60 GEGAIGTAAF TGKHRWMFSD ASFGELHSSM FEDNLEFQQQ FSCGIKTVAV IPVHPHGVIQ 120 LGSTHKIWES FEFLADAKRS LCQVINGGRR VQEKTMPMSS SADIFHFNEL FTSFIMSSNS 180 DDWSLGAVHN NSRTDFAGKS YASIDKQPAV LASSEPMPTS NIREQDAQYP SYSDADMLDS 240 CRNLVEYGHH SLRIATVSSG TGSLCMDNVQ QSARFPVIEG ELVESMTSRP DFCDEHLSED 300 FTMDLPDISL IDDLFQWFDS SPENGTNGAT TAVNDNLPQS TGISTLSSNL VEACKFVDGS 360 SKTSVVSARS CITNASQSSE QDNRIITQGA KDRLFDSLGL GTEAHESYSG GCNSMSTCSS 420 KLAIGSTDLP RKRLFWELGI EELLDGRSNT SSTTKSSVEN HQSIASRRSK MERSLFETNP 480 IQLLDPCTNV NPTQSSGTAD HFPCKKEATL KSPVSSWIDD SYSTNIGGSI LELSRKSEEP 540 VKTCKKRARP GESNRPRPKD RQQIQDRLKE LRGIIPSGAK CSIDSLLDRT IKYMLFLQSV 600 TKYADKLKET HEPKLIDQDD GVAVNDKCTT ERGGGGVTWA YKVGTTPIVC PVIVEDLSSP 660 GQMLIEMLCE ERGFFLEIAD MIRGYGLTIL KGMMEVREDK IWAQFVVEVK LNTNQSITRI 720 NVFLSLMELL QQTNISGAEL AS

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence

MAETELGSVL NRICSTNHWS YGVFWCFDRR NSMVLTLEDI WYEEQVGLVA ANMLQQVHML  60
GEGAIGTAAF TGKHRWMFSD ASFGELHSSM FEDNLEFQQQ FSCGIKTVAV IPVHPHGVIQ  120
LGSTHKIWES FEFLADAKRS LCQVINGGRR VQEKTMPMSS SADIFHFNEL FTSFIMSSNS  180
DDWSLGAVHN NSRTDFAGKS YASIDKQPAV LASSEPMPTS NIREQDAQYP SYSDADMLDS  240
CRNLVEYGHH SLRIATVSSG TGSLCMDNVQ QSARFPVIEG ELVESMTSRP DFCDEHLSED  300
FTMDLPDISL IDDLFQWFDS SPENGTNGAT TAVNDNLPQS TGISTLSSNL VEACKFVDGS  360
SKTSVVSARS CITNASQSSE QDNRIITQGA KDRLFDSLGL GTEAHESYSG GCNSMSTCSS  420
KLAIGSTDLP RKRLFWELGI EELLDGRSNT SSTTKSSVEN HQSIASRRSK MERSLFETNP  480
IQLLDPCTNV NPTQSSGTAD HFPCKKEATL KSPVSSWIDD SYSTNIGGSI LELSRKSEEP  540
VKTCKKRARP GESNRPRPKD RQQIQDRLKE LRGIIPSGAK CSIDSLLDRT IKYMLFLQSV  600
TKYADKLKET HEPKLIDQDD GVAVNDKCTT ERGGGGVTWA YKVGTTPIVC PVIVEDLSSP  660
GQMLIEMLCE ERGFFLEIAD MIRGYGLTIL KGMMEVREDK IWAQFVVEVK LNTNQSITRI  720
NVFLSLMELL QQTNISGAEL AS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	3e-48	bHLH family protein