PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965447.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 239aa MW: 27246.8 Da PI: 4.8384

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965447.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.7	3.6e-12	59	102	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er+RR+++N+++ Lr ++P+ ++++Ka+i + A+ YI++Lq XP_022965447.1 59 VSERNRRKKLNDRLIALRAVVPNI-----TRMDKASIIKDAITYIQELQ 102 57*******************7.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MDNILDEYLK NWETDMFLLT EDSGSGWGLE EAFYGAYNSS SPDGKVSPSS PSEASKNIVS 60 ERNRRKKLND RLIALRAVVP NITRMDKASI IKDAITYIQE LQAEEKRIKT EIFDLESSVN 120 NKRSRTTNQW NNENGDRIWT NMKWNQQTTD ASSSSSIEVL DLSVNYVGEK VMVVSLTCLR 180 RGNMILKVWE VIESLKLKII TANINVFANK LLNTLFIEAE REEEEKLKVQ IETAIANMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57150.1	5e-59	bHLH family protein