PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965632.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 655aa MW: 72285.9 Da PI: 5.8055

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	84.8	8.6e-27	211	264	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W eLH++F+ av++L G ekA+Pk+il+lm+v+gLt+e+v+SHLQkYR XP_022965632.1 211 KQRVVWFGELHRKFIAAVNHL-GYEKAVPKKILDLMNVEGLTRENVASHLQKYRQ 264 79*****************.9*****************************6 PP
2	Myb_DNA-binding	29.8	1.4e-09	215	263	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W e++ +++ av+ lG + +k+I m+ +g+t++++ s++qky+ XP_022965632.1 215 VWFGELHRKFIAAVNHLGYEkaVPKKILDLMNvEGLTRENVASHLQKYR 263 57779*******************************************7 PP
3	Response_reg	81.8	2.1e-27	26	134	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ +++l+++l+k +y +v+++ ++ +al++l+e++ +Dl++ D++mp+mdG++ll+ e++lp+i+++ah++ e++++ + G XP_022965632.1 26 VLAVDDDPICLKVLENLLRKCQY-HVTTTNQAIQALKMLRENRnkFDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMLSAHSDTELVKKGVFHG 118 799******************.***********999889***************87754.558****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_022965632.1 119 ACDYLLKPVRIEELKN 134 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MTVEDRRANL VGENGVMDQF PIGMRVLAVD DDPICLKVLE NLLRKCQYHV TTTNQAIQAL 60 KMLRENRNKF DLVISDVNMP DMDGFKLLEL VGLEMDLPVI MLSAHSDTEL VKKGVFHGAC 120 DYLLKPVRIE ELKNIWQHVL RRKTSSAKNQ NECTNGNDTL CQTVEVVKGF PSAASADNGK 180 PGKRRKDDDD DEEGGEEESA YETDDSSSQK KQRVVWFGEL HRKFIAAVNH LGYEKAVPKK 240 ILDLMNVEGL TRENVASHLQ KYRQYLKKMC TKEAQQCNMM AAFGGKDTSF RPMASLNGFS 300 MTGTGRLSNA TFSSYPSQGI VGRLNSTAGL SLHGIASSGM IQQGASHNLR SSLNILRKPH 360 PTLLLSNRPP SIFNSISTPS DHIQSHWDKH NAPFKESNLI NDVSSFTVST SFPDARVAVG 420 CSSNYDFGVS SHSLMLQGHK QQSHGSGEFR DQSCYKVSPI NPEPVDCSTG ISNILGGHGQ 480 SNKNWQGVSL TGTYPSDGMP AINLTISSAQ PDNENFPVGF PSTSVDSSSQ LDLRGETQCY 540 DELMDRVVDA MNDRSKQQWE TAKQNYYGNH SSILRNSLVS GNSVADPLDP SSADPNDVIC 600 LENIGSSLTN QLNSDAPAFI QQDAETLMME TWMNFDGKSL MDPTKLHYSF SSLDE

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MTVEDRRANL VGENGVMDQF PIGMRVLAVD DDPICLKVLE NLLRKCQYHV TTTNQAIQAL  60
KMLRENRNKF DLVISDVNMP DMDGFKLLEL VGLEMDLPVI MLSAHSDTEL VKKGVFHGAC  120
DYLLKPVRIE ELKNIWQHVL RRKTSSAKNQ NECTNGNDTL CQTVEVVKGF PSAASADNGK  180
PGKRRKDDDD DEEGGEEESA YETDDSSSQK KQRVVWFGEL HRKFIAAVNH LGYEKAVPKK  240
ILDLMNVEGL TRENVASHLQ KYRQYLKKMC TKEAQQCNMM AAFGGKDTSF RPMASLNGFS  300
MTGTGRLSNA TFSSYPSQGI VGRLNSTAGL SLHGIASSGM IQQGASHNLR SSLNILRKPH  360
PTLLLSNRPP SIFNSISTPS DHIQSHWDKH NAPFKESNLI NDVSSFTVST SFPDARVAVG  420
CSSNYDFGVS SHSLMLQGHK QQSHGSGEFR DQSCYKVSPI NPEPVDCSTG ISNILGGHGQ  480
SNKNWQGVSL TGTYPSDGMP AINLTISSAQ PDNENFPVGF PSTSVDSSSQ LDLRGETQCY  540
DELMDRVVDA MNDRSKQQWE TAKQNYYGNH SSILRNSLVS GNSVADPLDP SSADPNDVIC  600
LENIGSSLTN QLNSDAPAFI QQDAETLMME TWMNFDGKSL MDPTKLHYSF SSLDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-115	ARR-B family protein