PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965767.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 419aa MW: 44342.5 Da PI: 7.5285

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965767.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.7e-12	227	272	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022965767.1 227 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 272 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MRLTNSLPDR HSNRRNRPPE TDTSQHHHHQ NHLQTSHLHL SSFSSDDFLD QILSSIPLPW 60 ELPTGLPNPH SNLPPQPPPL SQNPDNAAFQ IGDTTPAAKI AMAMLHQQLL TTAADSSLLT 120 LPGNDVVEVE GSPSFKCPNP IIADGSVNPS LFNEFTGFLN ASGSSHSHNL NQSQGNSTST 180 SQKQSFGAPV SANTPPPVGT GSGGGASAAA QPRQRVRARR GQATDPHSIA ERLRRERIAE 240 RMKALQELVP NANKTDKASM LDEIIDYVKF LQLQVKVLSM SRLGGATASM PSQLVADMSS 300 HSEGEIDGNQ SNGTGGAAGQ AFAGAPAFNE TMAVTEHQVV KLMEKDMGSA MQYLQGKGLC 360 LMPISLATAI STATCHNRPV TASRGGGDRP TSASLSALTV QSTTLGNGTV KDKASISRP

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MRLTNSLPDR HSNRRNRPPE TDTSQHHHHQ NHLQTSHLHL SSFSSDDFLD QILSSIPLPW  60
ELPTGLPNPH SNLPPQPPPL SQNPDNAAFQ IGDTTPAAKI AMAMLHQQLL TTAADSSLLT  120
LPGNDVVEVE GSPSFKCPNP IIADGSVNPS LFNEFTGFLN ASGSSHSHNL NQSQGNSTST  180
SQKQSFGAPV SANTPPPVGT GSGGGASAAA QPRQRVRARR GQATDPHSIA ERLRRERIAE  240
RMKALQELVP NANKTDKASM LDEIIDYVKF LQLQVKVLSM SRLGGATASM PSQLVADMSS  300
HSEGEIDGNQ SNGTGGAAGQ AFAGAPAFNE TMAVTEHQVV KLMEKDMGSA MQYLQGKGLC  360
LMPISLATAI STATCHNRPV TASRGGGDRP TSASLSALTV QSTTLGNGTV KDKASISRP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	237	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	5e-58	bHLH family protein