PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022965907.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 192aa    MW: 22385 Da    PI: 7.8707
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022965907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.17.5e-172166148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l
   XP_022965907.1 21 RGGMSKEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 66
                     67799*****************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MRGGKSCRLR WKNYLRPNIK RGGMSKEEED LIIRMHKLLG NRWSLIAGRL PGRTDNEVKN  60
YWNTHLNKNG LQDKRKVNES NSCKKMDEDD GNNKKQKKVI NQTSYPQPQM CSDNGANQAH  120
DIQRRSQEEN REVTDLWNMD DITSYYNINC PMVPANNATF NFDDEPYYNH LDPFFLIEAF  180
GCSSVDASLE NM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52600.15e-42MYB family protein