PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022966000.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 399aa MW: 42238.3 Da PI: 6.3701

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022966000.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.3e-12	203	248	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022966000.1 203 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 248 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MQPCSREMQS LNSLLNNSQI SLQDLHGDEH HLNPPSEQIP GSQLHHFDPV AAASHDDFLE 60 QMLHTIPSCS WPDLNPSNPK SPWDINPINK PSRDISDTSP AAKAVVMLQQ QLLLSRGISS 120 VADHGLPPMP LSLSNADLDR SHNDIVDRSC FRPPNSGGGI QSHSFGAQGN MMNQAPDGGS 180 GGISPSQPKQ KVRARRGQAT DPHSIAERLR RERIAERMKA LQELVPNANK TDKASMLDEI 240 IDYVKFLQLQ VKVLSMSRLG GAAAVAPLVA DVSDEVSSLK GGGECMQGGR SSNGSGGNQT 300 ASSNDSVTVT EQQVARLMEK DMGSAMQYLQ GKGLCLMPIS LATAISTSTC PSRNPIINGS 360 GGHPVMGSNG EGPSSPSMSV LTVQSTSMGN GSVKDAASD

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MQPCSREMQS LNSLLNNSQI SLQDLHGDEH HLNPPSEQIP GSQLHHFDPV AAASHDDFLE  60
QMLHTIPSCS WPDLNPSNPK SPWDINPINK PSRDISDTSP AAKAVVMLQQ QLLLSRGISS  120
VADHGLPPMP LSLSNADLDR SHNDIVDRSC FRPPNSGGGI QSHSFGAQGN MMNQAPDGGS  180
GGISPSQPKQ KVRARRGQAT DPHSIAERLR RERIAERMKA LQELVPNANK TDKASMLDEI  240
IDYVKFLQLQ VKVLSMSRLG GAAAVAPLVA DVSDEVSSLK GGGECMQGGR SSNGSGGNQT  300
ASSNDSVTVT EQQVARLMEK DMGSAMQYLQ GKGLCLMPIS LATAISTSTC PSRNPIINGS  360
GGHPVMGSNG EGPSSPSMSV LTVQSTSMGN GSVKDAASD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	208	213	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	3e-67	bHLH family protein