PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022966871.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 314aa MW: 36174.2 Da PI: 8.3583

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022966871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.9	9.4e-07	22	42	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cg F+ + +Lk+H+++H XP_022966871.1 22 CHECGAAFKKPAYLKQHMQSH 42 *******************99 PP
2	zf-C2H2	16.1	3.3e-05	48	72	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C s++rk++L+rH+ H XP_022966871.1 48 YICTvdGCEASYRRKDHLTRHLLQH 72 899999***************9887 PP
3	zf-C2H2	15.1	6.8e-05	77	102	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C++ F s L+rH+++ H XP_022966871.1 77 FKCPieNCSREFAYLSCLNRHLKVfH 102 89*********************988 PP
4	zf-C2H2	19	3.9e-06	115	139	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk F+ s+L++H +H XP_022966871.1 115 FVCSedGCGKEFRYASQLQKHEDSH 139 89*******************9888 PP
5	zf-C2H2	16.7	2e-05	207	231	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 +C+ C+ +Fs++snL++H ++ H XP_022966871.1 207 RCTheGCSNVFSTSSNLRQHVKVvH 231 688889***************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MESGKYKDDG DDKAKDRKSN ICHECGAAFK KPAYLKQHMQ SHSLERPYIC TVDGCEASYR 60 RKDHLTRHLL QHQGMIFKCP IENCSREFAY LSCLNRHLKV FHEGSTPEVE GQKRFVCSED 120 GCGKEFRYAS QLQKHEDSHA KLDSVEACCS ELGCMKTFTN KQCLKAHVQS CHQYIECEIC 180 GEKKLRKNIK QHLRQKHESD GLQTTIRCTH EGCSNVFSTS SNLRQHVKVV HLGQKPFACC 240 FPGCGMRFGY KHVRDNHEKS GQHVYTDGDF EVADERFRSK PRGGRKRVCP TVEMLIRKRV 300 TPPTELNFMM DEDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-118	C2H2 family protein