PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022966932.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 351aa    MW: 38241 Da    PI: 6.8396
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022966932.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA551.1e-17256289134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_022966932.1 256 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 289
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MVGNSFVDDL DCGSFFDHID DLLDFPVEDV DAGLPPANGG DSGNSFPTIW STQSEALPGS  60
DSVFSANRNS DLSADLSVPY EDIVQLEWLS NFVEDSFCGG GSLAMGKEEP KYLTHTQFQT  120
SSPVSVLESS SSCSSDKSLP RSPEPTIATP AQQRGRARSK RPRPATFCPR PPIQLISPAS  180
SVSETTHDHH HQVLQVIAPK TTSDSDNFAE SRPLVKMPKH GVLGMQKKNK KIKLSFSLAP  240
LDGSSQNSPS QSMRKCMHCE ITKTPQWRAG PMGPKTLCNA CGVRYKSGRL FPEYRPAASP  300
TFVPSLHSNS HKKVLEMRNK TDEKTAANVI TITVQPELIP NTNSAISMDY M
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160164KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.16e-45GATA family protein