PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022967103.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 239aa    MW: 27419 Da    PI: 5.4961
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022967103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM143.71.1e-44171472128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     ppGfrF Pt+eel+++yL+++++g+ le ++vi+ ++iy++ePwdLpk     +k+++++w+fF+ r++++a+g r++r+t++gyWkatg+   v
  XP_022967103.1  17 PPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKfageLCKGDSEQWFFFVARQEREARGGRPSRITATGYWKATGSPVYV 111
                     9****************************99****************656764556778************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s+ ++ +glkkt+vfykgrap+g+kt+W m+eyr+
  XP_022967103.1 112 YSAANKIIGLKKTMVFYKGRAPTGTKTKWKMNEYRA 147
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MPMSMAIEEN NSNVEYPPGF RFYPTEEELI SFYLRHQLNG QLLEKHRVIP LLNIYDSEPW  60
DLPKFAGELC KGDSEQWFFF VARQEREARG GRPSRITATG YWKATGSPVY VYSAANKIIG  120
LKKTMVFYKG RAPTGTKTKW KMNEYRAIDD STKLRYEFSL CRVYVISGCF RAFDRRPMEI  180
IGGDRNNADQ KQKAEEITAA ISCSAPATGF CGVSGGRSGM VEEEEIEEAN WEWDQIDWP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.13e-82NAC family protein